Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Flavonifractor
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Flavonifractor |
| Species | Flavonifractor plautii |
| Strain | strain YL31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | human gut microbiota |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
746842 bp
Thymine Count
745973 bp
Guanine Count
1166796 bp
Cytosine Count
1158867 bp
Genome Length
3818478 bp
Protein-coding Genes
3605 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | A4U99_RS09035 | Not Available | Positive | 1836458 - 1837621 | 41240.8 |
| rip metalloprotease | A4U99_RS09040 | Not Available | Positive | 1837637 - 1838713 | 38672.7 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | A4U99_RS09045 | Not Available | Positive | 1838727 - 1839764 | 36266.2 |
| polc-type dna polymerase iii | A4U99_RS09050 | Not Available | Positive | 1839790 - 1843950 | 153717.0 |
| ferritin | A4U99_RS09055 | Not Available | Positive | 1844263 - 1844775 | 19656.2 |
| peptidoglycan-binding protein | A4U99_RS09060 | Not Available | Negative | 1844850 - 1845410 | 21029.3 |
| peptidoglycan-binding protein | A4U99_RS09065 | Not Available | Negative | 1845407 - 1846627 | 44726.9 |
| hypothetical protein | A4U99_RS09070 | Not Available | Negative | 1846640 - 1847029 | 13809.4 |
| redox-sensing transcriptional repressor rex | A4U99_RS09075 | Not Available | Positive | 1847198 - 1847830 | 22788.4 |
| hypothetical protein | A4U99_RS09080 | Not Available | Positive | 1847827 - 1848972 | 39600.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
