Flavonifractor plautii strain YL31

Gram-positiveRodFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Flavonifractor

Description

Flavonifractor plautii strain YL31 is a Gram-positive, facultative anaerobic bacterium primarily found in the human gut microbiota. Its rod-shaped morphology is characteristic of many members within the Firmicutes phylum. This particular strain is notable for its singular replicon, indicating a streamlined genomic structure. The strain is associated with human hosts, specifically Homo sapiens, and has been implicated in health effects such as bloodstream infections. This association raises concerns regarding the role of gut microbiota in systemic infections, highlighting the potential for opportunistic pathogenic behavior under certain conditions. Flavonifractor plautii strain YL31 is cataloged under the accession number NZ_CP015406.2, which denotes its genomic sequence in microbial databases. The presence of this strain in the human gut underscores the importance of understanding the complexities of gut microbiota and its contributions to both health and disease. The ability of this bacterium to thrive in the anaerobic environment of the gut while also adapting to oxygen presence exemplifies the versatility of gut microorganisms. In summary, Flavonifractor plautii strain YL31 serves as a pertinent example of how gut microbiota can play dual roles in human health, contributing to both beneficial functions and potential pathogenicity in the bloodstream. This duality emphasizes the need for ongoing research into the dynamics of gut microbiota and its implications for human health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusFlavonifractor
SpeciesFlavonifractor plautii
Strainstrain YL31

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathuman gut microbiota
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavonifractor plautii strain YL31 chromosome, complete genome.

Gene Summary

Adenine Count

746842 bp

Thymine Count

745973 bp

Guanine Count

1166796 bp

Cytosine Count

1158867 bp

Genome Length

3818478 bp

Protein-coding Genes

3605 genes

Non-Coding Genes

155 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
energy-coupling factor transporter atpaseA4U99_RS08490Not AvailableNegative1732575 - 173342930741.0
class i sam-dependent methyltransferaseA4U99_RS08495Not AvailableNegative1733445 - 173430832050.3
crispr-associated endonuclease cas2A4U99_RS08500Not AvailableNegative1735227 - 173551711199.6
type i-c crispr-associated endonuclease cas1cA4U99_RS08505Not AvailableNegative1735525 - 173655638362.2
crispr-associated protein cas4A4U99_RS08510Not AvailableNegative1736553 - 173721525328.4
type i-c crispr-associated protein cas7/csd2A4U99_RS08515Not AvailableNegative1737212 - 173810833251.6
type i-c crispr-associated protein cas8c/csd1A4U99_RS08520Not AvailableNegative1738110 - 173990365634.6
type i-c crispr-associated protein cas5cA4U99_RS08525Not AvailableNegative1739900 - 174056225478.7
crispr-associated helicase/endonuclease cas3A4U99_RS08530Not AvailableNegative1740584 - 174271377602.8
hypothetical proteinA4U99_RS08535Not AvailablePositive1742944 - 174366626839.3

Displaying genes 1771 – 1780 of 3760 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

269 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da

Displaying 1–10 of 269 metabolites

Health Effects

Health ConditionRelationReference
Bloodstream infectionCausesPMC11196211

Displaying health effects 1 – 1 of 1 in total