Azospirillum humicireducens strain SgZ-5

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Azospirillaceae

Genus

Azospirillum

Description

Azospirillum humicireducens strain SgZ-5 is a Gram-negative bacterium characterized by its possession of four replicons. This strain is part of the Azospirillum genus, which is known for its role in promoting plant growth through nitrogen fixation and other beneficial interactions with plants. The strain's genomic information can be accessed through several GenBank accession numbers: NZ_CP015285.1, NZ_CP028904.1, NZ_CP028905.1, and NZ_CP028903.1. These accessions provide a comprehensive resource for researchers interested in the genetic and functional analysis of A. humicireducens SgZ-5, facilitating further studies on its metabolic pathways and ecological roles. The presence of multiple replicons may suggest a complex regulation of gene expression and metabolic flexibility, which could be advantageous for adapting to various environmental conditions. This trait is particularly relevant in soil ecosystems, where such bacteria interact with plants and other microorganisms, contributing to nutrient cycling and soil health. Understanding the characteristics of A. humicireducens strain SgZ-5 can provide insights into its potential applications in agriculture, especially in sustainable practices aimed at enhancing plant growth and soil fertility through biological means. Its Gram-negative nature and genomic structure play significant roles in its functionality within the ecosystem, making it a valuable organism for further research in microbiology and agricultural science.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyAzospirillaceae
GenusAzospirillum
SpeciesAzospirillum humicireducens
Strainstrain SgZ-5

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Azospirillum humicireducens strain SgZ-5 plasmid pYZ2.

Gene Summary

Adenine Count

165061 bp

Thymine Count

160227 bp

Guanine Count

338849 bp

Cytosine Count

344466 bp

Genome Length

1014950 bp

Protein-coding Genes

860 genes

Non-Coding Genes

26 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sensor domain-containing diguanylate cyclaseA6A40_RS20055Not AvailablePositive528253 - 52944342804.1
rod shape-determining protein rodaA6A40_RS20060Not AvailablePositive529626 - 53079242115.4
family 16 glycosylhydrolaseA6A40_RS20065Not AvailablePositive530937 - 53174328946.8
abc transporter atp-binding proteinA6A40_RS20070Not AvailableNegative531754 - 53248226153.2
branched-chain amino acid abc transporter permeaseA6A40_RS20075Not AvailableNegative532484 - 53348835189.0
branched-chain amino acid abc transporter permeaseA6A40_RS20080Not AvailableNegative533485 - 53435430289.4
l,d-transpeptidaseA6A40_RS20085Not AvailableNegative534466 - 53559938841.9
tetratricopeptide repeat proteinA6A40_RS20090Not AvailablePositive535697 - 53749364685.3
lysr substrate-binding domain-containing proteinA6A40_RS20095Not AvailableNegative537593 - 53848331428.2
sulfite exporter taue/safe family proteinA6A40_RS20100Not AvailablePositive538855 - 53960725394.0

Displaying genes 471 – 480 of 4297 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.