Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| geved domain-containing protein | I596_RS04800 | Not Available | Positive | 1227200 - 1230040 | 95346.1 |
| gnat family n-acetyltransferase | I596_RS04805 | Not Available | Positive | 1230989 - 1231267 | 10027.1 |
| putative zinc-binding metallopeptidase | I596_RS04810 | P9WL94 | Positive | 1231355 - 1232440 | 40131.2 |
| m14 family metallopeptidase | I596_RS04815 | Not Available | Negative | 1232460 - 1234229 | 65075.3 |
| phzf family phenazine biosynthesis protein | I596_RS04820 | Q8NIL3 | Negative | 1234226 - 1235107 | 31639.6 |
| o-antigen ligase | I596_RS04825 | Not Available | Negative | 1235119 - 1236372 | 43972.8 |
| glycosyltransferase | I596_RS04830 | Not Available | Negative | 1236369 - 1237484 | 40128.8 |
| zinc-finger domain-containing protein | I596_RS04835 | Not Available | Negative | 1237492 - 1237698 | 7544.11 |
| yip1 family protein | I596_RS04840 | Not Available | Positive | 1237918 - 1239183 | 44213.0 |
| ycei family protein | I596_RS04845 | A4VRG3 | Negative | 1239273 - 1239854 | 20551.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
