Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | I596_RS04750 | Not Available | Positive | 1215142 - 1215453 | 11180.7 |
| aldo/keto reductase | I596_RS04755 | Not Available | Positive | 1215506 - 1216537 | 37347.3 |
| duf808 domain-containing protein | I596_RS04760 | P46125 | Negative | 1216837 - 1217769 | 31753.6 |
| type ii toxin-antitoxin system rele/pare family toxin | I596_RS04765 | P0AFJ3 | Negative | 1217876 - 1218082 | 7355.01 |
| helix-turn-helix domain-containing protein | I596_RS04770 | Not Available | Negative | 1218173 - 1218577 | 15401.8 |
| ykgj family cysteine cluster protein | I596_RS04775 | Not Available | Negative | 1218673 - 1218975 | 11189.5 |
| methyltransferase | I596_RS04780 | Not Available | Negative | 1219008 - 1219694 | 24356.8 |
| s41 family peptidase | I596_RS04785 | Not Available | Positive | 1220025 - 1223300 | 119111.0 |
| ydiu family protein | I596_RS04790 | Q3BSE3 | Positive | 1223410 - 1224969 | 57355.1 |
| atp-binding cassette domain-containing protein | I596_RS04795 | Q57242 | Positive | 1225004 - 1226869 | 68388.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
