Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cpxcg motif-containing cysteine-rich protein | I596_RS04700 | Not Available | Positive | 1203923 - 1204111 | 6792.96 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | I596_RS04705 | Q7KW39 | Positive | 1204733 - 1206256 | 53081.9 |
| acyl-coa dehydrogenase family protein | I596_RS04710 | Q9UKU7 | Positive | 1206268 - 1207443 | 41308.4 |
| enoyl-coa hydratase | I596_RS04715 | Not Available | Positive | 1207440 - 1208252 | 28854.4 |
| enoyl-coa hydratase/isomerase family protein | I596_RS04720 | Q58EB4 | Positive | 1208255 - 1209421 | 41085.7 |
| 3-hydroxyisobutyrate dehydrogenase | I596_RS04725 | Q9I5I6 | Positive | 1209418 - 1210308 | 29426.8 |
| ecf-type sigma factor | I596_RS04730 | Not Available | Negative | 1210341 - 1210913 | 20593.7 |
| serine/threonine-protein kinase | I596_RS04735 | Not Available | Positive | 1211035 - 1213389 | 83729.3 |
| gamma-glutamylcyclotransferase | I596_RS04740 | Q4KMJ1 | Negative | 1213793 - 1214401 | 22056.0 |
| gnat family n-acetyltransferase | I596_RS04745 | Not Available | Positive | 1214478 - 1215053 | 20699.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
