Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid asymmetry maintenance abc transporter permease subunit mlae | I596_RS04650 | P45030 | Negative | 1194714 - 1195484 | 27010.7 |
| abc transporter atp-binding protein | I596_RS04655 | P63388 | Negative | 1195481 - 1196317 | 29727.2 |
| guanylate kinase | I596_RS04660 | Q4UY41 | Negative | 1196410 - 1197027 | 23239.6 |
| yicc/yloc family endoribonuclease | I596_RS04665 | P23839 | Negative | 1197030 - 1197890 | 31835.2 |
| ribonuclease ph | I596_RS04670 | B4SU06 | Positive | 1197961 - 1198686 | 25781.9 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | I596_RS04675 | Q4UY37 | Positive | 1198683 - 1199291 | 20669.5 |
| hypothetical protein | I596_RS19215 | Not Available | Negative | 1199510 - 1200646 | 36176.2 |
| glycosyltransferase | I596_RS04685 | Not Available | Negative | 1200776 - 1201903 | 41373.0 |
| hypothetical protein | I596_RS04690 | Not Available | Positive | 1202022 - 1202645 | 20584.4 |
| radical sam family heme chaperone hemw | I596_RS04695 | P52062 | Positive | 1202752 - 1203930 | 42164.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
