Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate-5-semialdehyde dehydrogenase | I596_RS04525 | Q3BSJ1 | Positive | 1159833 - 1161110 | 44576.6 |
| pas domain-containing sensor histidine kinase | I596_RS04530 | P10955 | Positive | 1161091 - 1162401 | 47293.5 |
| spfh domain-containing protein | I596_RS04535 | P0AA55 | Positive | 1162499 - 1163452 | 34539.0 |
| nfed family protein | I596_RS04540 | Not Available | Positive | 1163464 - 1163928 | 16550.8 |
| porin | I596_RS04545 | Not Available | Negative | 1163983 - 1165128 | 39649.7 |
| duf779 domain-containing protein | I596_RS04550 | Not Available | Negative | 1165523 - 1165909 | 13969.8 |
| pentapeptide repeat-containing protein | I596_RS04555 | Not Available | Negative | 1165891 - 1166478 | 20648.3 |
| methanol/ethanol family pqq-dependent dehydrogenase | I596_RS04560 | Q9AGW3 | Negative | 1166534 - 1168402 | 67232.8 |
| cytochrome c-550 pedf | I596_RS04565 | Q9I2C5 | Negative | 1168481 - 1168954 | 16831.8 |
| aldehyde dehydrogenase | I596_RS04570 | P46368 | Negative | 1169069 - 1170589 | 55326.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
