Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-methyl-5-thioribose-1-phosphate isomerase | I596_RS04475 | Q3BV11 | Negative | 1153150 - 1154178 | 35706.9 |
| rhodanese-like domain-containing protein | I596_RS04480 | Not Available | Positive | 1154323 - 1154700 | 12624.9 |
| ribose-5-phosphate isomerase rpia | I596_RS04485 | Q2P6P9 | Negative | 1154737 - 1155381 | 22966.7 |
| eve domain-containing protein | I596_RS04490 | Q9P016 | Negative | 1155383 - 1155856 | 18277.7 |
| 5-formyltetrahydrofolate cyclo-ligase | I596_RS04495 | P44905 | Negative | 1155853 - 1156461 | 22634.8 |
| Ncrna_class:other | Not Available | Not Available | Positive | 1156487 - 1156676 | Not Available |
| cell division protein zapa | I596_RS04505 | Q9HTW3 | Negative | 1156684 - 1156977 | 10449.8 |
| tigr02449 family protein | I596_RS04510 | Not Available | Negative | 1156986 - 1157204 | 8358.06 |
| sorbosone dehydrogenase family protein | I596_RS04515 | O51055 | Positive | 1157434 - 1158552 | 39781.4 |
| glutamate 5-kinase | I596_RS04520 | Q5GZF1 | Positive | 1158676 - 1159824 | 39827.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
