Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m56 family metallopeptidase | I596_RS04375 | Not Available | Positive | 1129480 - 1131294 | 65337.6 |
| response regulator transcription factor | I596_RS04380 | Q44006 | Positive | 1131583 - 1132269 | 25020.4 |
| hamp domain-containing sensor histidine kinase | I596_RS04385 | P45336 | Positive | 1132253 - 1133551 | 47818.6 |
| branched-chain amino acid transaminase | I596_RS04390 | P0AB82 | Negative | 1133587 - 1134507 | 33126.7 |
| duf4124 domain-containing protein | I596_RS04395 | Not Available | Negative | 1134713 - 1135192 | 16580.9 |
| methylenetetrahydrofolate reductase | I596_RS04400 | O67422 | Negative | 1135204 - 1136037 | 30718.7 |
| lipopolysaccharide assembly protein lapb | I596_RS04405 | Not Available | Negative | 1136046 - 1137674 | 59748.5 |
| adenosylhomocysteinase | I596_RS04410 | Q3BXC6 | Negative | 1137907 - 1139346 | 52044.2 |
| phosphomethylpyrimidine synthase thic | I596_RS04415 | Q8PH13 | Positive | 1139736 - 1141613 | 69445.9 |
| hypothetical protein | I596_RS04420 | Not Available | Positive | 1141821 - 1142576 | 25686.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
