Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroloquinoline quinone-dependent dehydrogenase | I596_RS04325 | P15877 | Positive | 1111390 - 1113486 | 74159.0 |
| hypothetical protein | I596_RS04330 | Not Available | Negative | 1113643 - 1116036 | 81638.1 |
| hypothetical protein | I596_RS04335 | Not Available | Negative | 1116087 - 1118027 | 65830.4 |
| winged helix-turn-helix domain-containing protein | I596_RS04340 | A0QTK2 | Positive | 1118126 - 1120063 | 69035.5 |
| sialidase family protein | I596_RS04345 | Not Available | Negative | 1120393 - 1122084 | 59939.3 |
| response regulator transcription factor | I596_RS04350 | P9WMF8 | Positive | 1122287 - 1123015 | 26019.4 |
| two-component regulator propeller domain-containing protein | I596_RS04355 | P9WGK0 | Negative | 1123046 - 1126558 | 125710.0 |
| 30s ribosomal protein s6--l-glutamate ligase | I596_RS04360 | B2FSC4 | Positive | 1127163 - 1128074 | 32345.6 |
| hypothetical protein | I596_RS04365 | Not Available | Positive | 1128324 - 1128797 | 17206.3 |
| blai/meci/copy family transcriptional regulator | I596_RS04370 | Not Available | Positive | 1129088 - 1129483 | 14911.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
