Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome recycling factor | I596_RS04275 | Q4USQ7 | Negative | 1092947 - 1093504 | 20832.2 |
| slc13 family permease | I596_RS04280 | P72958 | Negative | 1093597 - 1095444 | 66117.5 |
| trna (guanosine(46)-n7)-methyltransferase trmb | I596_RS04285 | Q4UXY5 | Negative | 1095572 - 1096282 | 26261.2 |
| thiazole synthase | I596_RS04290 | Q3BQ15 | Negative | 1096279 - 1097082 | 28260.1 |
| sulfur carrier protein this | I596_RS04295 | Not Available | Negative | 1097132 - 1097332 | 7286.85 |
| duf6600 domain-containing protein | I596_RS04300 | Not Available | Negative | 1097456 - 1099804 | 86588.2 |
| Trna-gly | Not Available | Not Available | Positive | 1100059 - 1100132 | Not Available |
| response regulator transcription factor | I596_RS04310 | Not Available | Positive | 1100926 - 1101639 | 26358.9 |
| s-layer family protein | I596_RS04315 | Not Available | Positive | 1102036 - 1109226 | 240594.0 |
| duf11 domain-containing protein | I596_RS04320 | Not Available | Positive | 1109254 - 1110882 | 53711.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
