Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid-a-disaccharide synthase | I596_RS04225 | Q4USP7 | Negative | 1082279 - 1083451 | 41798.2 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | I596_RS04230 | B2FHN6 | Negative | 1083466 - 1084236 | 27451.6 |
| 3-hydroxyacyl-acp dehydratase fabz | I596_RS04235 | A3QG92 | Negative | 1084233 - 1084715 | 18105.4 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | I596_RS04240 | Q8PML5 | Negative | 1084712 - 1085737 | 35127.1 |
| omph family outer membrane protein | I596_RS04245 | Not Available | Negative | 1085734 - 1086255 | 20194.9 |
| outer membrane protein assembly factor bama | I596_RS04250 | B5F8T8 | Negative | 1086342 - 1088735 | 89700.0 |
| rip metalloprotease rsep | I596_RS04255 | Q9PEI1 | Negative | 1088815 - 1090161 | 47250.6 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | I596_RS04260 | Q5NZG9 | Negative | 1090172 - 1091350 | 40901.5 |
| phosphatidate cytidylyltransferase | I596_RS04265 | P0ABG2 | Negative | 1091347 - 1092183 | 29128.2 |
| polyprenyl diphosphate synthase | I596_RS04270 | Q5H1E5 | Negative | 1092180 - 1092926 | 27162.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
