Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate kinase | I596_RS04175 | B2FSF3 | Positive | 1067165 - 1068340 | 40392.9 |
| had hydrolase-like protein | I596_RS04180 | Q88QS2 | Positive | 1068357 - 1069016 | 22831.2 |
| glycosyltransferase family 39 protein | I596_RS04185 | Q2NWA9 | Positive | 1069013 - 1070632 | 57714.8 |
| agmatine deiminase family protein | I596_RS04190 | Not Available | Positive | 1070741 - 1071901 | 42320.1 |
| agmatine deiminase family protein | I596_RS04195 | Not Available | Positive | 1072158 - 1073336 | 42444.0 |
| hypothetical protein | I596_RS04200 | Not Available | Negative | 1073413 - 1074813 | 50082.7 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | I596_RS04205 | Q8PMM1 | Negative | 1074931 - 1075887 | 35091.4 |
| dna polymerase iii subunit alpha | I596_RS04210 | Q87EY0 | Negative | 1075966 - 1079463 | 127265.0 |
| ribonuclease hii | I596_RS04215 | B8GQ66 | Negative | 1079558 - 1080151 | 20706.3 |
| lta synthase family protein | I596_RS04220 | P43975 | Negative | 1080148 - 1081881 | 64193.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
