Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | I596_RS04125 | Not Available | Positive | 1053491 - 1055482 | 72734.3 |
| pqq-dependent dehydrogenase, methanol/ethanol family | I596_RS04130 | P28036 | Negative | 1056633 - 1058360 | 63077.2 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | I596_RS04135 | Q9ZFB7 | Negative | 1058428 - 1059021 | 20428.8 |
| aldehyde dehydrogenase | I596_RS04140 | P25553 | Negative | 1059113 - 1060549 | 51846.9 |
| duf1097 domain-containing protein | I596_RS04145 | Not Available | Negative | 1060578 - 1061057 | 16177.3 |
| transporter | I596_RS04150 | Not Available | Negative | 1061135 - 1062010 | 32422.9 |
| glycosyltransferase | I596_RS04155 | Not Available | Positive | 1062473 - 1063675 | 43276.9 |
| lipid a hydroxylase lpxo | I596_RS04160 | Not Available | Positive | 1063841 - 1064743 | 34950.2 |
| hypothetical protein | I596_RS04165 | Not Available | Negative | 1064934 - 1065218 | 10119.0 |
| phospholipase d-like domain-containing protein | I596_RS04170 | P71040 | Positive | 1065439 - 1066794 | 47893.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
