Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarylacetoacetate hydrolase family protein | I596_RS04075 | Not Available | Positive | 1043113 - 1044114 | 35573.3 |
| maleylacetoacetate isomerase | I596_RS04080 | Q9KSB2 | Positive | 1044169 - 1044837 | 25525.7 |
| udp-2,3-diacylglucosamine diphosphatase | I596_RS04085 | Not Available | Negative | 1044901 - 1045725 | 31433.6 |
| class i sam-dependent methyltransferase | I596_RS04090 | Q98K73 | Negative | 1045722 - 1046453 | 26955.8 |
| duf3419 family protein | I596_RS04095 | Not Available | Negative | 1046440 - 1047663 | 46200.0 |
| gnat family n-acyltransferase | I596_RS04100 | Not Available | Positive | 1047795 - 1049534 | 64597.8 |
| fadr/gntr family transcriptional regulator | I596_RS04105 | P0ACL7 | Negative | 1049592 - 1050326 | 26831.0 |
| (fe-s)-binding protein | I596_RS04110 | C3LCL5 | Positive | 1050422 - 1051204 | 27559.9 |
| lactate utilization protein c | I596_RS04115 | Q9JYT7 | Positive | 1051201 - 1051884 | 23951.8 |
| lutb/lldf family l-lactate oxidation iron-sulfur protein | I596_RS04120 | P77536 | Positive | 1051881 - 1053338 | 53438.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
