Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-2,3-diacylglucosamine diphosphatase | I596_RS04025 | P58975 | Negative | 1031397 - 1032122 | 26740.8 |
| peptidylprolyl isomerase | I596_RS04030 | P23869 | Negative | 1032390 - 1033022 | 22482.0 |
| dihydrolipoamide acetyltransferase family protein | I596_RS04035 | P09062 | Negative | 1033441 - 1034853 | 48010.1 |
| alpha-ketoacid dehydrogenase subunit beta | I596_RS04040 | P21874 | Negative | 1034871 - 1035851 | 35299.6 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | I596_RS04045 | P35485 | Negative | 1035897 - 1036973 | 39367.6 |
| tryptophan 2,3-dioxygenase | I596_RS04050 | B2FKN7 | Positive | 1037449 - 1038306 | 33203.8 |
| peptide mfs transporter | I596_RS04055 | P94408 | Positive | 1038444 - 1039949 | 54576.3 |
| marr family winged helix-turn-helix transcriptional regulator | I596_RS04060 | Not Available | Negative | 1040007 - 1040462 | 17253.7 |
| 4-hydroxyphenylpyruvate dioxygenase | I596_RS04065 | O06695 | Positive | 1040552 - 1041655 | 41373.1 |
| homogentisate 1,2-dioxygenase | I596_RS04070 | A9I714 | Positive | 1041772 - 1043079 | 47723.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
