Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol reductant abc exporter subunit cydc | I596_RS03925 | P23886 | Positive | 1008833 - 1010524 | 58498.8 |
| hypothetical protein | I596_RS03930 | Not Available | Negative | 1010598 - 1011191 | 20705.6 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | I596_RS03935 | Q51698 | Negative | 1011196 - 1013409 | 78001.2 |
| type ii toxin-antitoxin system rele/pare family toxin | I596_RS03940 | Not Available | Negative | 1013420 - 1013877 | 15694.7 |
| ferredoxin--nadp reductase | I596_RS03945 | Q44532 | Negative | 1014015 - 1014791 | 28771.6 |
| transketolase | I596_RS03950 | Q8DCA2 | Negative | 1014976 - 1016970 | 71259.6 |
| porin family protein | I596_RS03955 | Not Available | Positive | 1017359 - 1017931 | 20127.5 |
| aspartate aminotransferase family protein | I596_RS03960 | Q8PH31 | Positive | 1018080 - 1019318 | 44099.8 |
| glutamate-1-semialdehyde 2,1-aminomutase | I596_RS03965 | B2FT35 | Negative | 1019469 - 1020755 | 45320.5 |
| thiamine phosphate synthase | I596_RS03970 | Q4UYA4 | Negative | 1020752 - 1021384 | 21754.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
