Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eal domain-containing protein | I596_RS03875 | P76129 | Positive | 997283 - 999862 | 93950.4 |
| duf456 domain-containing protein | I596_RS03880 | Not Available | Positive | 999987 - 1000472 | 16330.0 |
| paqr family membrane homeostasis protein trha | I596_RS03885 | P54176 | Negative | 1000469 - 1001128 | 23563.3 |
| hypothetical protein | I596_RS03890 | Not Available | Negative | 1001378 - 1001725 | 11650.5 |
| universal stress protein | I596_RS03895 | Not Available | Positive | 1001902 - 1002729 | 29743.7 |
| type i glyceraldehyde-3-phosphate dehydrogenase | I596_RS03900 | P50321 | Negative | 1002789 - 1003802 | 36090.1 |
| cytochrome ubiquinol oxidase subunit i | I596_RS03905 | Q09049 | Positive | 1004148 - 1005737 | 58553.0 |
| cytochrome d ubiquinol oxidase subunit ii | I596_RS03910 | P0ABK4 | Positive | 1005743 - 1006888 | 41928.8 |
| cytochrome bd-i oxidase subunit cydx | I596_RS03915 | Not Available | Positive | 1006899 - 1007009 | 4117.03 |
| thiol reductant abc exporter subunit cydd | I596_RS03920 | P29018 | Positive | 1007088 - 1008836 | 60422.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
