Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspl | I596_RS03825 | Not Available | Positive | 983785 - 984987 | 41590.5 |
| type ii secretion system protein gspm | I596_RS03830 | Not Available | Positive | 984984 - 985475 | 17455.8 |
| type ii secretion system protein n | I596_RS03835 | Not Available | Positive | 985554 - 986321 | 27201.8 |
| inositol monophosphatase family protein | I596_RS03840 | Q9K4B1 | Positive | 986335 - 987147 | 28749.1 |
| aspartate kinase | I596_RS03845 | P27725 | Positive | 987354 - 989717 | 81533.6 |
| transcriptional regulator | I596_RS03850 | Not Available | Positive | 989816 - 992191 | 82486.2 |
| geved domain-containing protein | I596_RS03855 | Not Available | Positive | 992395 - 994116 | 58870.1 |
| duf4785 domain-containing protein | I596_RS03860 | Not Available | Negative | 994305 - 995507 | 41189.3 |
| hypothetical protein | I596_RS03865 | Not Available | Negative | 995519 - 996379 | 30972.6 |
| gnat family n-acetyltransferase | I596_RS03870 | O34569 | Negative | 996512 - 997093 | 21076.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
