Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction resolvase ruvx | I596_RS03725 | Q8PII0 | Positive | 953133 - 953600 | 16428.4 |
| aspartate carbamoyltransferase catalytic subunit | I596_RS03730 | Q4UWY7 | Positive | 953597 - 954538 | 33474.3 |
| hypothetical protein | I596_RS03735 | Not Available | Positive | 954569 - 956254 | 59858.0 |
| hlyd family secretion protein | I596_RS03740 | Q92V44 | Negative | 956292 - 957314 | 35699.6 |
| abc transporter atp-binding protein | I596_RS03745 | A1B677 | Negative | 957332 - 958057 | 25830.3 |
| abc transporter permease | I596_RS18385 | Not Available | Negative | 958054 - 959199 | 40869.1 |
| choice-of-anchor q domain-containing protein | I596_RS03755 | Not Available | Negative | 959424 - 961844 | 78310.8 |
| hypothetical protein | I596_RS03760 | Not Available | Negative | 961997 - 964987 | 103330.0 |
| winged helix-turn-helix domain-containing protein | I596_RS03765 | Not Available | Negative | 965249 - 967645 | 85729.2 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | I596_RS03770 | Q9CE00 | Negative | 967804 - 968598 | 28625.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
