Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | I596_RS03625 | P63390 | Positive | 924508 - 926073 | 57573.7 |
| acyltransferase | I596_RS03630 | Q2FV54 | Negative | 926121 - 927284 | 42850.5 |
| sodium-translocating pyrophosphatase | I596_RS03635 | Q8P5M6 | Positive | 927482 - 929515 | 69800.3 |
| prolyl oligopeptidase family protein | I596_RS03640 | P55577 | Positive | 929641 - 931695 | 76346.0 |
| energy transducer tonb | I596_RS03645 | Q9RMT3 | Positive | 932594 - 933253 | 23094.1 |
| roadblock/lc7 domain-containing protein | I596_RS03650 | Not Available | Positive | 933891 - 934298 | 13903.0 |
| hypothetical protein | I596_RS03655 | Not Available | Positive | 934372 - 934779 | 14582.9 |
| metallophosphoesterase | I596_RS03660 | Q58322 | Positive | 934809 - 936308 | 53713.9 |
| serine/threonine protein kinase | I596_RS03665 | Not Available | Negative | 936352 - 937008 | 25010.4 |
| polyprenyl synthetase family protein | I596_RS03670 | P0AD57 | Negative | 937122 - 938051 | 32870.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
