Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | I596_RS03575 | P9WJZ0 | Positive | 913925 - 914827 | 33339.2 |
| nad(p)-dependent oxidoreductase | I596_RS03580 | Q6P5L8 | Negative | 915110 - 915931 | 29110.2 |
| lon peptidase substrate-binding domain-containing protein | I596_RS03585 | Not Available | Negative | 916100 - 916699 | 22215.9 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | I596_RS03590 | P37773 | Negative | 916753 - 918108 | 48108.6 |
| adenylate kinase | I596_RS03595 | B2FT48 | Negative | 918170 - 918733 | 19798.1 |
| 6-phosphofructokinase | I596_RS03600 | B0RP51 | Positive | 918898 - 920157 | 45072.3 |
| acyltransferase | I596_RS03605 | P32129 | Positive | 920163 - 921047 | 33370.3 |
| lysr family transcriptional regulator | I596_RS03610 | P42722 | Negative | 921101 - 922072 | 36242.0 |
| tigr03032 family protein | I596_RS03615 | Not Available | Positive | 922224 - 923363 | 41102.1 |
| sigma factor-like helix-turn-helix dna-binding protein | I596_RS03620 | Not Available | Positive | 923495 - 924064 | 20475.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
