Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| disulfide isomerase dsbc n-terminal domain-containing protein | I596_RS03475 | P0AEG7 | Positive | 890383 - 891120 | 26136.7 |
| phosphoribosylformylglycinamidine synthase | I596_RS03480 | Q8PCQ7 | Positive | 891439 - 895284 | 137576.0 |
| exosortase h-associated membrane protein | I596_RS03485 | Not Available | Positive | 895242 - 895961 | 25527.4 |
| type ii secretion system atpase gspe | I596_RS03490 | P31742 | Positive | 896056 - 897717 | 61858.0 |
| type ii secretion system inner membrane protein gspf | I596_RS03495 | P31744 | Positive | 897734 - 898951 | 44090.8 |
| type ii secretion system major pseudopilin gspg | I596_RS03500 | Q00514 | Positive | 898979 - 899413 | 15450.2 |
| gsph/fimt family pseudopilin | I596_RS03505 | Not Available | Positive | 899455 - 899913 | 16466.0 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | I596_RS03510 | Not Available | Positive | 899945 - 900562 | 21320.3 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | I596_RS03515 | P31740 | Positive | 900559 - 901311 | 28167.0 |
| general secretion pathway protein gspk | I596_RS03520 | P34026 | Positive | 901308 - 902216 | 33069.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
