Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator oxyr | I596_RS03425 | P0ACQ6 | Negative | 876636 - 877607 | 35440.4 |
| pycsar system effector family protein | I596_RS03430 | Not Available | Positive | 877962 - 878513 | 20344.8 |
| hypothetical protein | I596_RS03435 | Not Available | Positive | 878733 - 882860 | 147584.0 |
| peptide chain release factor n(5)-glutamine methyltransferase | I596_RS03440 | Q8PC99 | Positive | 882857 - 883708 | 29571.3 |
| hypothetical protein | I596_RS03445 | Not Available | Positive | 883953 - 884273 | 11074.3 |
| 1-deoxy-d-xylulose-5-phosphate synthase | I596_RS03450 | Q4UW29 | Negative | 884596 - 886485 | 68183.1 |
| atp/gtp-binding protein | I596_RS03455 | Not Available | Negative | 886660 - 887217 | 20085.0 |
| hypothetical protein | I596_RS03460 | Not Available | Negative | 887217 - 888323 | 39098.3 |
| site-specific tyrosine recombinase xerd | I596_RS03465 | Q8PGR5 | Positive | 888505 - 889422 | 33307.4 |
| dsbc family protein | I596_RS03470 | P45111 | Positive | 889587 - 890357 | 27133.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
