Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deaminase | I596_RS03375 | Not Available | Negative | 868129 - 868689 | 20404.4 |
| hypothetical protein | I596_RS03380 | Not Available | Negative | 868689 - 869024 | 11302.6 |
| glutamine--trna ligase/yqey domain fusion protein | I596_RS03385 | Q3BX52 | Negative | 869021 - 870748 | 65335.2 |
| acyltransferase | I596_RS03390 | Q8Y7I6 | Negative | 870779 - 872065 | 47319.6 |
| duf3253 domain-containing protein | I596_RS18680 | Not Available | Negative | 872065 - 872403 | 12382.1 |
| duf2007 domain-containing protein | I596_RS18685 | Not Available | Positive | 872482 - 872739 | 8879.51 |
| dmt family transporter | I596_RS03405 | Not Available | Positive | 872736 - 873635 | 31963.2 |
| alpha/beta fold hydrolase | I596_RS03410 | Q8P6V8 | Positive | 873899 - 874891 | 34539.6 |
| cystathionine gamma-synthase | I596_RS03415 | P00935 | Positive | 874888 - 876081 | 41492.5 |
| nucleoside diphosphate kinase regulator | I596_RS03420 | P0AFW6 | Negative | 876137 - 876553 | 14817.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
