Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | I596_RS03325 | Not Available | Positive | 851789 - 852424 | 23149.6 |
| duf1003 domain-containing protein | I596_RS03330 | Not Available | Positive | 852522 - 853157 | 23685.5 |
| 2-methylcitrate synthase | I596_RS03335 | Q937N9 | Positive | 853154 - 854302 | 42034.5 |
| atp-dependent rna helicase dbpa | I596_RS03340 | P21693 | Negative | 854357 - 855721 | 48682.2 |
| translocation/assembly module tamb domain-containing protein | I596_RS03345 | D2TN57 | Negative | 855897 - 859637 | 128944.0 |
| autotransporter assembly complex family protein | I596_RS03350 | D2TN56 | Negative | 859634 - 861382 | 63541.5 |
| glycosyltransferase | I596_RS03355 | Not Available | Negative | 861500 - 864094 | 98864.5 |
| duf6311 domain-containing protein | I596_RS03360 | Not Available | Negative | 864230 - 865939 | 61890.7 |
| tvp38/tmem64 family protein | I596_RS03365 | Not Available | Negative | 866099 - 866815 | 24768.1 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | I596_RS03370 | Q5GWE6 | Negative | 866966 - 868021 | 39281.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
