Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system aminomethyltransferase gcvt | I596_RS03280 | Q3BQN6 | Positive | 840745 - 841833 | 38983.9 |
| glycine cleavage system protein gcvh | I596_RS03285 | Q2P4S4 | Positive | 841946 - 842341 | 14205.4 |
| aminomethyl-transferring glycine dehydrogenase subunit gcvpa | I596_RS03290 | B8GN16 | Positive | 842452 - 843816 | 48900.6 |
| met regulon transcriptional regulator metj | I596_RS19165 | Q8DCN7 | Positive | 844211 - 844666 | 16320.5 |
| propionate--coa ligase | I596_RS03300 | P77495 | Positive | 845138 - 847033 | 68616.9 |
| tetr/acrr family transcriptional regulator | I596_RS03305 | Not Available | Negative | 847355 - 847921 | 20093.0 |
| mfs transporter | I596_RS03310 | O31444 | Positive | 848038 - 849288 | 42969.0 |
| hypothetical protein | I596_RS19170 | Not Available | Positive | 849285 - 849407 | 4079.31 |
| citrate synthase family protein | I596_RS03315 | Not Available | Negative | 849521 - 850750 | 43540.1 |
| methylisocitrate lyase | I596_RS03320 | Q937P0 | Positive | 850888 - 851784 | 31857.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
