Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | I596_RS03230 | P30855 | Positive | 831553 - 833088 | 55595.4 |
| kinase | I596_RS03235 | Not Available | Negative | 833103 - 833930 | 30636.3 |
| pyridoxamine 5'-phosphate oxidase | I596_RS03240 | Q2P6C7 | Positive | 833929 - 834552 | 23497.6 |
| cobalamin-binding protein | I596_RS03245 | O34805 | Positive | 834552 - 835358 | 29088.1 |
| 2og-fe(ii) oxygenase | I596_RS03250 | Not Available | Positive | 835421 - 836755 | 49075.0 |
| duf4426 domain-containing protein | I596_RS03255 | Not Available | Negative | 836797 - 837231 | 16090.2 |
| yggt family protein | I596_RS03260 | P64566 | Negative | 837236 - 837814 | 21051.1 |
| pyrroline-5-carboxylate reductase | I596_RS03265 | P22008 | Negative | 837829 - 838653 | 27759.4 |
| yggs family pyridoxal phosphate-dependent enzyme | I596_RS03270 | P24562 | Negative | 838747 - 839427 | 24270.2 |
| type iv pilus twitching motility protein pilt | I596_RS03275 | P24559 | Positive | 839604 - 840641 | 38470.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
