Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps translocon maturation chaperone lptm | I596_RS18905 | Not Available | Positive | 822976 - 823095 | 4113.22 |
| diaminopimelate epimerase | I596_RS03185 | Q8PPQ1 | Positive | 823149 - 823958 | 27979.6 |
| duf484 family protein | I596_RS03190 | Not Available | Positive | 824064 - 824750 | 25005.2 |
| tyrosine recombinase xerc | I596_RS03195 | Q4UYY0 | Positive | 824752 - 825651 | 32931.6 |
| hypothetical protein | I596_RS03200 | Not Available | Negative | 825831 - 826124 | 10582.3 |
| atp-dependent protease subunit hslv | I596_RS03205 | Q606K2 | Positive | 826401 - 826934 | 18972.8 |
| atp-dependent protease atpase subunit hslu | I596_RS03210 | Q8PPP7 | Positive | 827025 - 828362 | 49211.9 |
| hypothetical protein | I596_RS03215 | Not Available | Positive | 828792 - 829334 | 20213.8 |
| hypothetical protein | I596_RS03220 | Not Available | Positive | 829353 - 831056 | 61379.9 |
| rab family gtpase | I596_RS03225 | P11620 | Positive | 831053 - 831556 | 17988.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
