Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | I596_RS02960 | Q9HWX4 | Positive | 763824 - 764912 | 39061.1 |
| 6,7-dimethyl-8-ribityllumazine synthase | I596_RS02965 | B4SJC0 | Positive | 765004 - 765468 | 15848.0 |
| transcription antitermination factor nusb | I596_RS02970 | B2I8Q4 | Positive | 765465 - 765920 | 17522.9 |
| thiamine-phosphate kinase | I596_RS02975 | P55881 | Positive | 765949 - 766905 | 32728.0 |
| phosphatidylglycerophosphatase a | I596_RS02980 | P18200 | Positive | 766902 - 767396 | 17453.5 |
| hypothetical protein | I596_RS02985 | Not Available | Positive | 767415 - 767822 | 14675.3 |
| hypothetical protein | I596_RS02990 | Not Available | Negative | 767984 - 768610 | 22641.7 |
| fad-binding oxidoreductase | I596_RS02995 | P94535 | Negative | 768739 - 770118 | 47649.7 |
| bon domain-containing protein | I596_RS03000 | P46028 | Negative | 770157 - 770744 | 21151.3 |
| yran family protein | I596_RS03005 | A4VIG6 | Negative | 770758 - 771108 | 12586.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
