Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate dehydrogenase | I596_RS02860 | Q3BUJ8 | Negative | 735351 - 736418 | 37365.9 |
| quinone-dependent dihydroorotate dehydrogenase | I596_RS02865 | Q2P3M0 | Negative | 736415 - 737485 | 37839.6 |
| cytochrome c | I596_RS02870 | Not Available | Negative | 737666 - 738145 | 17112.5 |
| class i sam-dependent methyltransferase | I596_RS02875 | Not Available | Negative | 738232 - 739005 | 28242.5 |
| aldehyde dehydrogenase family protein | I596_RS02880 | P46562 | Negative | 739327 - 740859 | 53916.4 |
| mur ligase family protein | I596_RS02885 | O86109 | Negative | 740967 - 742742 | 61072.0 |
| cyanophycin synthetase | I596_RS02890 | Not Available | Negative | 742746 - 745532 | 100005.0 |
| cyanophycinase | I596_RS02895 | P56946 | Negative | 745655 - 746491 | 29393.8 |
| Trna-arg | Not Available | Not Available | Positive | 746671 - 746747 | Not Available |
| tonb-dependent receptor domain-containing protein | I596_RS02905 | A7ML93 | Positive | 747429 - 750215 | 102059.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
