Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| reprolysin-like metallopeptidase | I596_RS02810 | B4SLL0 | Positive | 722120 - 723328 | 42053.6 |
| hd family hydrolase | I596_RS02815 | Not Available | Negative | 723339 - 723983 | 23089.4 |
| transglycosylase slt domain-containing protein | I596_RS02820 | Not Available | Negative | 723935 - 725962 | 74005.6 |
| endonuclease/exonuclease/phosphatase family protein | I596_RS02825 | Not Available | Negative | 726048 - 726878 | 30062.1 |
| thiol:disulfide interchange protein dsba/dsbl | I596_RS02830 | Q7WDP8 | Negative | 726962 - 727618 | 24085.6 |
| thiol:disulfide interchange protein dsba/dsbl | I596_RS02835 | Q02DM0 | Negative | 727669 - 728343 | 23935.5 |
| cytochrome c4 | I596_RS02840 | P00106 | Negative | 728443 - 729108 | 22744.2 |
| duf1501 domain-containing protein | I596_RS02845 | Not Available | Negative | 729251 - 730660 | 48818.5 |
| duf1800 domain-containing protein | I596_RS02850 | Not Available | Negative | 730666 - 732456 | 66339.5 |
| serine/threonine-protein kinase | I596_RS02855 | Not Available | Positive | 732634 - 735405 | 100061.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
