Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin trxa | I596_RS02760 | Q9X2T1 | Positive | 710455 - 710781 | 12048.5 |
| transcription termination factor rho | I596_RS02765 | Q9PA21 | Positive | 711043 - 712674 | 60031.6 |
| hypothetical protein | I596_RS02770 | Not Available | Negative | 712968 - 713396 | 15673.7 |
| nucleotidyltransferase domain-containing protein | I596_RS02775 | Not Available | Negative | 713374 - 713958 | 20945.4 |
| duf1624 domain-containing protein | I596_RS02780 | Not Available | Positive | 714366 - 715538 | 42077.9 |
| voc family protein | I596_RS02785 | Not Available | Positive | 715597 - 716016 | 15594.6 |
| s9 family peptidase | I596_RS02790 | E4UYL6 | Negative | 716086 - 718503 | 89376.2 |
| hypothetical protein | I596_RS02795 | Not Available | Positive | 718745 - 720142 | 51380.7 |
| complex i ndufa9 subunit family protein | I596_RS02800 | Not Available | Negative | 720139 - 721050 | 33321.7 |
| dimethylarginine dimethylaminohydrolase family protein | I596_RS02805 | Q09359 | Positive | 721220 - 722047 | 29948.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
