Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase/bleomycin resistance/extradiol dioxygenase family protein | I596_RS02710 | Not Available | Negative | 695717 - 696127 | 14780.7 |
| trmb family transcriptional regulator | I596_RS02715 | Not Available | Positive | 696207 - 697064 | 31550.0 |
| type ii secretion system atpase gspe | I596_RS02720 | Q00512 | Negative | 697267 - 698745 | 53714.7 |
| type ii secretion system secretin gspd | I596_RS02725 | E3PJ86 | Negative | 698742 - 700799 | 72018.2 |
| type ii secretion system protein n | I596_RS02730 | Not Available | Negative | 700822 - 701715 | 30448.8 |
| hypothetical protein | I596_RS18355 | Not Available | Positive | 701946 - 703532 | 55268.1 |
| ecf-type sigma factor | I596_RS18670 | Not Available | Positive | 703652 - 704218 | 20897.9 |
| serine/threonine-protein kinase | I596_RS02745 | Not Available | Positive | 704292 - 707192 | 104703.0 |
| ompa family protein | I596_RS02750 | P38369 | Positive | 707333 - 708331 | 35972.4 |
| atp-dependent rna helicase rhlb | I596_RS02755 | Q8PFZ3 | Negative | 708378 - 710105 | 62439.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
