Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit seca | I596_RS02610 | Q3BXE3 | Positive | 673466 - 676183 | 102344.0 |
| nudix family hydrolase | I596_RS02615 | P77788 | Positive | 676240 - 677187 | 33839.0 |
| dephospho-coa kinase | I596_RS02620 | Q3JEA9 | Negative | 677200 - 677829 | 22887.4 |
| tonb-dependent siderophore receptor | I596_RS02625 | O52903 | Positive | 678230 - 681190 | 108635.0 |
| 3-dehydroquinate synthase | I596_RS02630 | B2I9G0 | Negative | 682310 - 683380 | 38202.0 |
| shikimate kinase | I596_RS02635 | B8GPV2 | Negative | 683377 - 683928 | 20078.0 |
| exosortase h | I596_RS02640 | Not Available | Positive | 684065 - 684574 | 19186.1 |
| response regulator transcription factor | I596_RS02645 | Q52990 | Positive | 684737 - 685501 | 28479.9 |
| hypothetical protein | I596_RS02650 | Not Available | Positive | 685574 - 686188 | 21936.1 |
| atp synthase subunit i | I596_RS02655 | Not Available | Positive | 686427 - 686795 | 12444.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
