Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative lipid ii flippase ftsw | I596_RS02560 | Q5GW40 | Positive | 662584 - 663792 | 43008.0 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | I596_RS02565 | Q8PPA8 | Positive | 663789 - 664877 | 37652.9 |
| udp-n-acetylmuramate--l-alanine ligase | I596_RS02570 | Q9PF80 | Positive | 664874 - 666313 | 51285.6 |
| d-alanine--d-alanine ligase | I596_RS02575 | Q8PPA6 | Positive | 666310 - 667248 | 33207.7 |
| cell division protein ftsq/divib | I596_RS02580 | F9ZZP5 | Positive | 667245 - 667991 | 26623.0 |
| cell division protein ftsa | I596_RS02585 | P47203 | Positive | 667994 - 669229 | 43405.0 |
| cell division protein ftsz | I596_RS02590 | P47204 | Positive | 669425 - 670606 | 41113.8 |
| udp-3-o-acyl-n-acetylglucosamine deacetylase | I596_RS02595 | B8GMN6 | Positive | 670824 - 671735 | 33623.2 |
| duf721 domain-containing protein | I596_RS02600 | Not Available | Negative | 671827 - 672312 | 17700.5 |
| m23 family metallopeptidase | I596_RS02605 | P0AFT0 | Positive | 672311 - 673252 | 33338.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
