Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | I596_RS02510 | Not Available | Positive | 649293 - 649496 | 7023.74 |
| winged helix-turn-helix domain-containing protein | I596_RS02515 | Not Available | Positive | 649816 - 652227 | 86288.0 |
| choice-of-anchor q domain-containing protein | I596_RS02520 | Not Available | Positive | 652740 - 654125 | 46001.5 |
| division/cell wall cluster transcriptional repressor mraz | I596_RS02525 | B4SJW7 | Positive | 655144 - 655590 | 16494.8 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | I596_RS02530 | B2I9C0 | Positive | 655623 - 656531 | 32783.5 |
| cell division protein ftsl | I596_RS02535 | Q8PCK6 | Positive | 656531 - 656797 | 9976.11 |
| penicillin-binding protein 2 | I596_RS02540 | G3XD46 | Positive | 656862 - 658658 | 64598.5 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | I596_RS02545 | Q4UQW6 | Positive | 658655 - 660139 | 50943.9 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | I596_RS02550 | P11880 | Positive | 660133 - 661512 | 47320.8 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | I596_RS02555 | A1U3G1 | Positive | 661502 - 662584 | 38859.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
