Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| patatin-like phospholipase family protein | I596_RS02460 | Not Available | Positive | 637132 - 638430 | 47213.0 |
| tetratricopeptide repeat protein | I596_RS02465 | Q9I7B1 | Positive | 638427 - 638741 | 10946.2 |
| iron abc transporter permease | I596_RS02470 | Not Available | Negative | 638779 - 640434 | 57587.1 |
| extracellular solute-binding protein | I596_RS02475 | P72827 | Negative | 640454 - 641491 | 37002.5 |
| abc transporter atp-binding protein | I596_RS02480 | Q7NWX3 | Negative | 641503 - 642648 | 40478.8 |
| lipid a biosynthesis acyltransferase | I596_RS02485 | Not Available | Negative | 642843 - 643766 | 33913.5 |
| d-aminoacyl-trna deacylase | I596_RS02490 | B2FIQ2 | Positive | 643901 - 644341 | 15589.8 |
| rna polymerase sigma factor rpod | I596_RS02495 | Q8P4H2 | Positive | 644596 - 646440 | 69782.5 |
| hypothetical protein | I596_RS02500 | Not Available | Negative | 646528 - 647652 | 39498.9 |
| meta and duf4377 domain-containing protein | I596_RS02505 | Not Available | Positive | 647895 - 648722 | 29309.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
