Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmsc/ynfh family molybdoenzyme membrane anchor subunit | I596_RS02410 | D3RNN6 | Positive | 625856 - 626818 | 34017.0 |
| ydiy family protein | I596_RS02415 | Not Available | Positive | 626931 - 627728 | 29297.3 |
| hydroxymethylbilane synthase | I596_RS02420 | B2FI06 | Negative | 627792 - 628706 | 32089.9 |
| lyttr family dna-binding domain-containing protein | I596_RS02425 | P26275 | Negative | 628703 - 629434 | 26643.5 |
| sensor histidine kinase | I596_RS02430 | P0AA94 | Negative | 629431 - 630468 | 37167.8 |
| alpha/beta hydrolase | I596_RS02435 | Q5RBR7 | Negative | 630826 - 631485 | 23751.5 |
| glycosyltransferase family 39 protein | I596_RS02440 | Not Available | Positive | 631778 - 633511 | 63855.6 |
| cdp-glycerol glycerophosphotransferase family protein | I596_RS02445 | Not Available | Positive | 633620 - 634672 | 38378.4 |
| sigma-54 dependent transcriptional regulator | I596_RS02450 | Q04849 | Positive | 634779 - 636182 | 51124.2 |
| 3-hydroxybutyrate dehydrogenase | I596_RS02455 | O86034 | Positive | 636353 - 637135 | 27192.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
