Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilx n-terminal domain-containing pilus assembly protein | I596_RS02360 | Not Available | Negative | 616049 - 616726 | 23738.1 |
| pilw family protein | I596_RS02365 | Not Available | Negative | 616744 - 618039 | 46496.0 |
| type iv pilus modification protein pilv | I596_RS02370 | Not Available | Negative | 618054 - 618584 | 19187.9 |
| gsph/fimt family pseudopilin | I596_RS02375 | Not Available | Negative | 618596 - 619219 | 21208.2 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | I596_RS02380 | Q8PN17 | Negative | 619347 - 620294 | 34634.2 |
| signal peptidase ii | I596_RS02385 | Q4US41 | Negative | 620304 - 620801 | 17416.4 |
| hypothetical protein | I596_RS02390 | Not Available | Positive | 620973 - 621398 | 15196.2 |
| molybdopterin oxidoreductase family protein | I596_RS02395 | D3RNN8 | Positive | 621740 - 624595 | 104764.0 |
| 4fe-4s dicluster domain-containing protein | I596_RS02400 | D3RNN7 | Positive | 624592 - 625440 | 29912.6 |
| ybjq family protein | I596_RS02405 | A6L2T0 | Positive | 625521 - 625850 | 11584.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
