Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | I596_RS02310 | Not Available | Positive | 602323 - 605091 | 96916.0 |
| ydbl family protein | I596_RS02315 | Not Available | Positive | 605114 - 605713 | 21782.9 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | I596_RS02320 | Q3BVV1 | Positive | 605778 - 607076 | 47745.6 |
| cyth domain-containing protein | I596_RS02325 | A3DIJ8 | Positive | 607088 - 607603 | 19284.1 |
| beta-n-acetylhexosaminidase | I596_RS02330 | B4SRK3 | Positive | 607686 - 608699 | 35918.4 |
| hypoxanthine-guanine phosphoribosyltransferase | I596_RS02335 | P0DD40 | Positive | 608704 - 609243 | 19451.5 |
| s-methyl-5'-thioinosine phosphorylase | I596_RS02340 | Q8PB40 | Positive | 609240 - 609989 | 26635.0 |
| abc transporter transmembrane domain-containing protein | I596_RS02345 | Q9NRK6 | Negative | 610026 - 611813 | 63766.6 |
| type iv pilin protein | I596_RS18665 | Not Available | Negative | 611910 - 612317 | 14689.5 |
| pilus assembly protein | I596_RS02355 | S0HPF7 | Negative | 612385 - 616038 | 130838.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
