Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-e factor negative regulatory protein | I596_RS02260 | Not Available | Positive | 592546 - 593220 | 23479.8 |
| mucb/rseb c-terminal domain-containing protein | I596_RS02265 | Not Available | Positive | 593298 - 594218 | 33513.8 |
| degq family serine endoprotease | I596_RS02270 | A6VUA4 | Positive | 594333 - 595742 | 48598.9 |
| translation elongation factor 4 | I596_RS02275 | B4SRL3 | Positive | 595902 - 597695 | 65911.7 |
| signal peptidase i | I596_RS02280 | P26844 | Positive | 597718 - 598569 | 31610.3 |
| duf4845 domain-containing protein | I596_RS02285 | Not Available | Positive | 598632 - 599045 | 15177.5 |
| ribonuclease iii | I596_RS02290 | B2I604 | Positive | 599053 - 599709 | 23840.1 |
| gtpase era | I596_RS02295 | B4SRK9 | Positive | 599706 - 600608 | 33149.0 |
| dna repair protein reco | I596_RS02300 | B4SRK8 | Positive | 600612 - 601349 | 26925.6 |
| response regulator | I596_RS02305 | P59342 | Negative | 601316 - 602023 | 25125.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
