Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exea family protein | I596_RS02215 | P45754 | Negative | 578064 - 579656 | 57754.1 |
| bax inhibitor-1 family protein | I596_RS02220 | P0AAC7 | Negative | 579798 - 580466 | 23358.1 |
| aldehyde dehydrogenase | I596_RS02225 | Q0P5F9 | Negative | 580545 - 582002 | 51917.0 |
| transposase | I596_RS02230 | Not Available | Positive | 582542 - 582835 | 10916.0 |
| is3 family transposase | I596_RS17950 | P16940 | Positive | 582832 - 583701 | 32458.4 |
| ig-like domain-containing protein | I596_RS02235 | Not Available | Negative | 584437 - 586206 | 59325.7 |
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | I596_RS02240 | B5XVW2 | Negative | 586520 - 588568 | 73765.7 |
| hypothetical protein | I596_RS02245 | Not Available | Positive | 588722 - 589201 | 18079.0 |
| eal domain-containing protein | I596_RS02250 | Not Available | Positive | 589205 - 591817 | 95658.0 |
| rna polymerase sigma factor rpoe | I596_RS02255 | Not Available | Positive | 591952 - 592539 | 22441.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
