Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | I596_RS02160 | Q04850 | Positive | 562501 - 564657 | 78774.6 |
| abc transporter permease | I596_RS02165 | P77504 | Negative | 564713 - 567193 | 86647.8 |
| abc transporter atp-binding protein | I596_RS02170 | P0A9T9 | Negative | 567190 - 567879 | 24432.4 |
| arylesterase | I596_RS02175 | Q9HZY8 | Positive | 567878 - 568504 | 22135.0 |
| isoaspartyl peptidase/l-asparaginase family protein | I596_RS02180 | P37595 | Positive | 568558 - 569532 | 33794.2 |
| mbl fold metallo-hydrolase | I596_RS02185 | Not Available | Negative | 569569 - 570336 | 28655.4 |
| s9 family peptidase | I596_RS02190 | V5YMB3 | Negative | 570537 - 572498 | 72337.4 |
| dna polymerase i | I596_RS02195 | Q9HT80 | Positive | 572826 - 575552 | 98699.1 |
| rhomboid family intramembrane serine protease | I596_RS02205 | Not Available | Negative | 576483 - 577166 | 24779.0 |
| general secretion pathway protein gspb | I596_RS02210 | Not Available | Negative | 577232 - 578053 | 27963.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
