Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1800 family protein | I596_RS02110 | Not Available | Positive | 550047 - 551765 | 61948.4 |
| duf1501 domain-containing protein | I596_RS02115 | Not Available | Positive | 551863 - 553293 | 50617.1 |
| l-threonylcarbamoyladenylate synthase | I596_RS02120 | A1WZH9 | Negative | 553300 - 553857 | 19113.0 |
| dna topoisomerase i | I596_RS02125 | Q87AQ6 | Negative | 553889 - 556390 | 92237.0 |
| dna-processing protein dpra | I596_RS02130 | P30852 | Negative | 556599 - 557741 | 39388.3 |
| lysm peptidoglycan-binding domain-containing protein | I596_RS02135 | Not Available | Negative | 557853 - 558974 | 41715.4 |
| peptide deformylase | I596_RS02140 | Q8P4F9 | Positive | 559218 - 559745 | 19269.4 |
| methionyl-trna formyltransferase | I596_RS02145 | B2FIR3 | Positive | 559754 - 560704 | 33442.4 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | I596_RS02150 | Q8P4G1 | Positive | 560701 - 562008 | 46626.4 |
| duf4390 domain-containing protein | I596_RS02155 | Not Available | Positive | 561983 - 562522 | 19541.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
