Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonucleotide-diphosphate reductase subunit beta | I596_RS02060 | P36603 | Negative | 537021 - 538049 | 39767.5 |
| ribonucleoside-diphosphate reductase subunit alpha | I596_RS02065 | Q9SJ20 | Negative | 538157 - 540652 | 91473.5 |
| hypothetical protein | I596_RS02070 | Not Available | Negative | 541159 - 542589 | 49435.8 |
| nucleoside recognition domain-containing protein | I596_RS02075 | P35158 | Positive | 542741 - 544009 | 44267.1 |
| hypothetical protein | I596_RS02080 | Not Available | Negative | 544034 - 544231 | 7424.92 |
| hypothetical protein | I596_RS02085 | Not Available | Negative | 544309 - 544962 | 22293.4 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | I596_RS02090 | A4Y077 | Positive | 545190 - 546719 | 54242.9 |
| murein hydrolase activator envc | I596_RS02095 | P44833 | Positive | 546719 - 547873 | 41993.1 |
| s41 family peptidase | I596_RS02100 | Q44879 | Positive | 548007 - 549347 | 47113.4 |
| duf1820 family protein | I596_RS02105 | Not Available | Negative | 549358 - 549696 | 12689.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
