Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | I596_RS02010 | B2SRB2 | Negative | 513717 - 515291 | 55175.9 |
| helix-turn-helix domain-containing protein | I596_RS02015 | Q8PQ10 | Negative | 515366 - 515644 | 10035.2 |
| apc family permease | I596_RS02020 | Not Available | Positive | 515849 - 517177 | 44485.1 |
| winged helix-turn-helix domain-containing protein | I596_RS02025 | Not Available | Negative | 517296 - 519674 | 84163.4 |
| fg-gap repeat protein | I596_RS02030 | Not Available | Positive | 520268 - 522982 | 91697.2 |
| phospholipase d-like domain-containing protein | I596_RS02035 | Not Available | Negative | 523857 - 525305 | 52270.4 |
| choice-of-anchor q domain-containing protein | I596_RS02040 | Not Available | Negative | 525475 - 529926 | 150757.0 |
| winged helix-turn-helix domain-containing protein | I596_RS02045 | Not Available | Negative | 530071 - 532563 | 88847.2 |
| bile acid:sodium symporter family protein | I596_RS02050 | P39879 | Negative | 532672 - 533679 | 35564.0 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | I596_RS02055 | B2I621 | Positive | 534522 - 536822 | 83869.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
