Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase biotin carboxylase subunit | I596_RS01860 | O52058 | Positive | 476651 - 478018 | 49226.4 |
| 50s ribosomal protein l11 methyltransferase | I596_RS01865 | B2FJP0 | Positive | 478038 - 478934 | 32308.4 |
| duf488 family protein | I596_RS01870 | Not Available | Positive | 479078 - 479608 | 19487.3 |
| 5-demethoxyubiquinol-8 5-hydroxylase ubim | I596_RS01875 | A1KVW0 | Negative | 479703 - 480899 | 41880.8 |
| zinc-ribbon and duf3426 domain-containing protein | I596_RS01880 | Not Available | Positive | 481112 - 481909 | 29159.8 |
| atp-dependent helicase hrpb | I596_RS01885 | P37024 | Positive | 481933 - 484464 | 89769.8 |
| adenylate/guanylate cyclase domain-containing protein | I596_RS01890 | Not Available | Positive | 484538 - 485434 | 32545.7 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | I596_RS01895 | Not Available | Negative | 485537 - 486139 | 21244.2 |
| phosphoribosylamine--glycine ligase | I596_RS01900 | Q8PD48 | Negative | 486147 - 487436 | 45084.0 |
| arac family transcriptional regulator | I596_RS01905 | Not Available | Negative | 487506 - 488459 | 34958.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
