Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | I596_RS01810 | Not Available | Positive | 468653 - 469204 | 21357.4 |
| hypothetical protein | I596_RS01815 | Not Available | Positive | 469201 - 470016 | 28302.8 |
| yigz family protein | I596_RS01820 | P32438 | Positive | 470086 - 470688 | 21489.6 |
| pig-l family deacetylase | I596_RS01825 | Not Available | Positive | 470984 - 471886 | 31911.0 |
| dmt family protein | I596_RS01830 | Not Available | Negative | 472354 - 472692 | 12711.9 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | I596_RS01835 | B2FTY5 | Positive | 472861 - 473472 | 22269.8 |
| duf1328 domain-containing protein | I596_RS01840 | Not Available | Positive | 473579 - 473752 | 5779.65 |
| dna primase | I596_RS01845 | P0ABS6 | Positive | 473841 - 475574 | 63848.4 |
| type ii 3-dehydroquinate dehydratase | I596_RS01850 | Q2P849 | Positive | 475687 - 476136 | 15601.8 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | I596_RS01855 | P0ABE0 | Positive | 476182 - 476637 | 15782.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
